Dca55376.1
Annotation
- 4-exons
- f-1
- sp|B9H731_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559103#GO:0003913;GO:0006281#1F1P0C
- AT4G08920.1 | Symbols: CRY1, BLU1, HY4, OOP2, ATCRY1 | cryptochrome 1 | chr4:5724260-5726905 FORWARD LENGTH=681
- Repeat List (scaffold770)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55376.1 |
8 |
701 |
701 |
76.46 |
694 |
78 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H731_POPTR |
2 |
680 |
680 |
99.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55376.1 |
14 |
701 |
701 |
71.75 |
688 |
73 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G08920.1 |
15 |
681 |
681 |
97.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold770 |
Augus-PASA |
mRNA |
57854 |
61188 |
. |
+ |
. |
ID=Dca55376.1;Parent=Dca55376 |
| scaffold770 |
Augus-PASA |
exon |
57854 |
58184 |
. |
+ |
. |
ID=Dca55376.1.exon1;Parent=Dca55376.1 |
| scaffold770 |
Augustus |
exon |
59164 |
59382 |
. |
+ |
. |
ID=Dca55376.1.exon2;Parent=Dca55376.1 |
| scaffold770 |
Augustus |
exon |
59492 |
60198 |
. |
+ |
. |
ID=Dca55376.1.exon3;Parent=Dca55376.1 |
| scaffold770 |
Augustus |
exon |
60340 |
61188 |
. |
+ |
. |
ID=Dca55376.1.exon4;Parent=Dca55376.1 |
