Carnation DB

Dca55408.1

Annotation

11-exons
f-1
sp|F6HH22_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g03960#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
sp|B9RKR8_RICCO#Kif4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1053050#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
Repeat List (scaffold7707)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55408.1	1	441	1005	32.13	441	69	3e-177
Target_name	Start	End	Length	Cov(%)
sp\|F6HH22_VITVI	215	683	683	68.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55408.1	1	441	1005	29.45	441	67	2e-161
Target_name	Start	End	Length	Cov(%)
AT3G16060.1	268	684	684	60.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7707	Augustus	mRNA	3281	9904	.	-	.	ID=Dca55408.1;Parent=Dca55408
scaffold7707	Augustus	exon	3281	3850	.	-	.	ID=Dca55408.1.exon1;Parent=Dca55408.1
scaffold7707	Augustus	exon	3936	4028	.	-	.	ID=Dca55408.1.exon2;Parent=Dca55408.1
scaffold7707	Augustus	exon	4563	5030	.	-	.	ID=Dca55408.1.exon3;Parent=Dca55408.1
scaffold7707	Augustus	exon	5116	5540	.	-	.	ID=Dca55408.1.exon4;Parent=Dca55408.1
scaffold7707	Augustus	exon	6053	6192	.	-	.	ID=Dca55408.1.exon5;Parent=Dca55408.1
scaffold7707	Augustus	exon	7782	7957	.	-	.	ID=Dca55408.1.exon6;Parent=Dca55408.1
scaffold7707	Augus-PASA	exon	8052	8117	.	-	.	ID=Dca55408.1.exon7;Parent=Dca55408.1
scaffold7707	Augus-PASA	exon	8478	8895	.	-	.	ID=Dca55408.1.exon8;Parent=Dca55408.1
scaffold7707	Augus-PASA	exon	8973	9191	.	-	.	ID=Dca55408.1.exon9;Parent=Dca55408.1
scaffold7707	Augustus	exon	9384	9686	.	-	.	ID=Dca55408.1.exon10;Parent=Dca55408.1
scaffold7707	Augustus	exon	9765	9904	.	-	.	ID=Dca55408.1.exon11;Parent=Dca55408.1