Dca55488.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7730)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55488.1 |
34 |
1526 |
1530 |
53.39 |
1493 |
54 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1 |
1453 |
1501 |
96.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55488.1 |
468 |
1490 |
1530 |
25.35 |
1023 |
38 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
421 |
1410 |
1539 |
64.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7730 |
Augustus |
mRNA |
29702 |
34363 |
. |
+ |
. |
ID=Dca55488.1;Parent=Dca55488 |
| scaffold7730 |
Augustus |
exon |
29702 |
33839 |
. |
+ |
. |
ID=Dca55488.1.exon1;Parent=Dca55488.1 |
| scaffold7730 |
Augustus |
exon |
33909 |
34363 |
. |
+ |
. |
ID=Dca55488.1.exon2;Parent=Dca55488.1 |
