Dca55512.1
Annotation
- 2-exons
- f-1
- sp|Q9M1N9_ARATH#Putative uncharacterized protein T18B22.50#Arabidopsis thaliana (Mouse-ear cress)#Name=T18B22.50#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold774)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55512.1 |
128 |
327 |
330 |
27.87 |
200 |
46 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9M1N9_ARATH |
54 |
253 |
762 |
26.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55512.1 |
135 |
315 |
330 |
20.9 |
181 |
38 |
4e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
403 |
584 |
857 |
21.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold774 |
Augustus |
mRNA |
44828 |
47918 |
. |
- |
. |
ID=Dca55512.1;Parent=Dca55512 |
| scaffold774 |
Augustus |
exon |
44828 |
45439 |
. |
- |
. |
ID=Dca55512.1.exon1;Parent=Dca55512.1 |
| scaffold774 |
Augustus |
exon |
47538 |
47918 |
. |
- |
. |
ID=Dca55512.1.exon2;Parent=Dca55512.1 |
