Dca55529.1
Annotation
- 2-exons
- f-1
- sp|Q53N07_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g14650#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold7747)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55529.1 |
54 |
1061 |
1067 |
40.58 |
1008 |
42 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53N07_ORYSJ |
71 |
1065 |
1535 |
64.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55529.1 |
358 |
830 |
1067 |
18.18 |
473 |
41 |
4e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
62 |
538 |
707 |
67.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7747 |
Augustus |
mRNA |
333 |
4031 |
. |
- |
. |
ID=Dca55529.1;Parent=Dca55529 |
| scaffold7747 |
Augustus |
exon |
333 |
1099 |
. |
- |
. |
ID=Dca55529.1.exon1;Parent=Dca55529.1 |
| scaffold7747 |
Augustus |
exon |
1595 |
4031 |
. |
- |
. |
ID=Dca55529.1.exon2;Parent=Dca55529.1 |
