Carnation DB

Dca55534.1

Annotation

9-exons
f-1
sp|B9HBI1_POPTR#Histidine kinase cytokinin receptor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_802509#GO:0016020;GO:0005524;GO:0004872;GO:0000156;GO:0000155;GO:0018106;GO:0006355#4F2P1C
Repeat List (scaffold775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55534.1	5	637	661	60.51	633	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HBI1_POPTR	12	626	923	66.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55534.1	487	653	661	15.58	167	62	8e-48
Target_name	Start	End	Length	Cov(%)
AT5G10720.1	473	629	922	17.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold775	Augustus	mRNA	11592	15341	.	-	.	ID=Dca55534.1;Parent=Dca55534
scaffold775	Augustus	exon	11592	11750	.	-	.	ID=Dca55534.1.exon1;Parent=Dca55534.1
scaffold775	Augustus	exon	11874	11980	.	-	.	ID=Dca55534.1.exon2;Parent=Dca55534.1
scaffold775	Augustus	exon	12071	12279	.	-	.	ID=Dca55534.1.exon3;Parent=Dca55534.1
scaffold775	Augustus	exon	12840	12915	.	-	.	ID=Dca55534.1.exon4;Parent=Dca55534.1
scaffold775	Augustus	exon	13321	13590	.	-	.	ID=Dca55534.1.exon5;Parent=Dca55534.1
scaffold775	Augustus	exon	13737	13943	.	-	.	ID=Dca55534.1.exon6;Parent=Dca55534.1
scaffold775	Augustus	exon	14031	14124	.	-	.	ID=Dca55534.1.exon7;Parent=Dca55534.1
scaffold775	Augustus	exon	14210	14437	.	-	.	ID=Dca55534.1.exon8;Parent=Dca55534.1
scaffold775	Augustus	exon	14706	15341	.	-	.	ID=Dca55534.1.exon9;Parent=Dca55534.1