Carnation DB

Dca55562.1

Annotation

6-exons
f-1
sp|A5BLV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_033389#GO:0003676;GO:0015074#1F1P0C
sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55562.1	17	1113	1113	40.79	1097	35	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BLV0_VITVI	16	1279	1279	98.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55562.1	600	775	1113	6.73	176	43	4e-32
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	23	174	1262	12.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold775	Augustus	mRNA	174848	179212	.	-	.	ID=Dca55562.1;Parent=Dca55562
scaffold775	Augustus	exon	174848	175867	.	-	.	ID=Dca55562.1.exon1;Parent=Dca55562.1
scaffold775	Augustus	exon	176117	176677	.	-	.	ID=Dca55562.1.exon2;Parent=Dca55562.1
scaffold775	Augustus	exon	176825	177216	.	-	.	ID=Dca55562.1.exon3;Parent=Dca55562.1
scaffold775	Augustus	exon	177610	177787	.	-	.	ID=Dca55562.1.exon4;Parent=Dca55562.1
scaffold775	Augustus	exon	177926	178783	.	-	.	ID=Dca55562.1.exon5;Parent=Dca55562.1
scaffold775	Augustus	exon	178880	179212	.	-	.	ID=Dca55562.1.exon6;Parent=Dca55562.1