Dca55640.1
Annotation
- 3-exons
- f-1
- sp|B9MZJ8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827334#unknown#0F0P0C
- Os12t0165000-01 WD40 repeat-like domain containing protein.
- Repeat List (scaffold7777)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55640.1 |
13 |
108 |
108 |
58.33 |
96 |
65 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MZJ8_POPTR |
666 |
761 |
761 |
12.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55640.1 |
17 |
104 |
108 |
49.07 |
88 |
60 |
4e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05090.1 |
664 |
749 |
753 |
11.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7777 |
Augustus |
mRNA |
23954 |
24917 |
. |
- |
. |
ID=Dca55640.1;Parent=Dca55640 |
| scaffold7777 |
Augustus |
exon |
23954 |
24052 |
. |
- |
. |
ID=Dca55640.1.exon1;Parent=Dca55640.1 |
| scaffold7777 |
Augustus |
exon |
24501 |
24689 |
. |
- |
. |
ID=Dca55640.1.exon2;Parent=Dca55640.1 |
| scaffold7777 |
Augustus |
exon |
24879 |
24917 |
. |
- |
. |
ID=Dca55640.1.exon3;Parent=Dca55640.1 |
