Carnation DB

Dca55655.1

Annotation

12-exons
f-1
sp|F6GSS7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g01850#GO:0003723#1F0P0C
sp|D6QX33_NICBE#Plastid RNA-binding protein#Nicotiana benthamiana#Name=PTAC10#GO:0003723#1F0P0C
Repeat List (scaffold778)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55655.1	5	591	591	74.11	587	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GSS7_VITVI	38	674	674	94.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55655.1	12	241	591	28.25	230	72	3e-97
Target_name	Start	End	Length	Cov(%)
AT3G48500.2	40	274	697	33.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold778	Augustus	mRNA	76557	86723	.	+	.	ID=Dca55655.1;Parent=Dca55655
scaffold778	Augustus	exon	76557	76571	.	+	.	ID=Dca55655.1.exon1;Parent=Dca55655.1
scaffold778	Augustus	exon	77920	78182	.	+	.	ID=Dca55655.1.exon2;Parent=Dca55655.1
scaffold778	Augustus	exon	79501	79852	.	+	.	ID=Dca55655.1.exon3;Parent=Dca55655.1
scaffold778	Augustus	exon	80107	80166	.	+	.	ID=Dca55655.1.exon4;Parent=Dca55655.1
scaffold778	Augustus	exon	80258	80287	.	+	.	ID=Dca55655.1.exon5;Parent=Dca55655.1
scaffold778	Augustus	exon	81919	81992	.	+	.	ID=Dca55655.1.exon6;Parent=Dca55655.1
scaffold778	Augustus	exon	82107	82173	.	+	.	ID=Dca55655.1.exon7;Parent=Dca55655.1
scaffold778	Augustus	exon	83029	83121	.	+	.	ID=Dca55655.1.exon8;Parent=Dca55655.1
scaffold778	Augustus	exon	83929	84105	.	+	.	ID=Dca55655.1.exon9;Parent=Dca55655.1
scaffold778	Augustus	exon	84201	84251	.	+	.	ID=Dca55655.1.exon10;Parent=Dca55655.1
scaffold778	Augustus	exon	85654	85805	.	+	.	ID=Dca55655.1.exon11;Parent=Dca55655.1
scaffold778	Augustus	exon	86282	86723	.	+	.	ID=Dca55655.1.exon12;Parent=Dca55655.1