Carnation DB

Dca55740.1

Annotation

19-exons
f-607
sp|D7TP60_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g01070#GO:0005488#1F0P0C
AT2G47980.1 | Symbols: SCC3, ATSCC3 | sister-chromatid cohesion protein 3 | chr2:19631423-19636795 FORWARD LENGTH=1098
Repeat List (scaffold78)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55740.1	17	199	199	56.28	183	62	9e-55
Target_name	Start	End	Length	Cov(%)
sp\|B9S3Y7_RICCO	13	194	1106	16.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55740.1	37	199	199	47.23	163	57	2e-44
Target_name	Start	End	Length	Cov(%)
AT2G47980.1	31	193	1098	14.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold78	Augustus	mRNA	328005	337139	.	-	.	ID=Dca55740.1;Parent=Dca55740
scaffold78	Augustus	exon	328005	328264	.	-	.	ID=Dca55740.1.exon1;Parent=Dca55740.1
scaffold78	Augustus	exon	328893	329017	.	-	.	ID=Dca55740.1.exon2;Parent=Dca55740.1
scaffold78	Augustus	exon	329109	329374	.	-	.	ID=Dca55740.1.exon3;Parent=Dca55740.1
scaffold78	Augustus	exon	329640	329777	.	-	.	ID=Dca55740.1.exon4;Parent=Dca55740.1
scaffold78	Augustus	exon	329890	329993	.	-	.	ID=Dca55740.1.exon5;Parent=Dca55740.1
scaffold78	Augustus	exon	330580	330724	.	-	.	ID=Dca55740.1.exon6;Parent=Dca55740.1
scaffold78	Augustus	exon	330818	331018	.	-	.	ID=Dca55740.1.exon7;Parent=Dca55740.1
scaffold78	Augustus	exon	331118	331255	.	-	.	ID=Dca55740.1.exon8;Parent=Dca55740.1
scaffold78	Augustus	exon	331331	331531	.	-	.	ID=Dca55740.1.exon9;Parent=Dca55740.1
scaffold78	Augustus	exon	332139	332312	.	-	.	ID=Dca55740.1.exon10;Parent=Dca55740.1
scaffold78	Augustus	exon	332420	332538	.	-	.	ID=Dca55740.1.exon11;Parent=Dca55740.1
scaffold78	Augustus	exon	332633	332778	.	-	.	ID=Dca55740.1.exon12;Parent=Dca55740.1
scaffold78	Augustus	exon	332882	333060	.	-	.	ID=Dca55740.1.exon13;Parent=Dca55740.1
scaffold78	Augustus	exon	333204	333348	.	-	.	ID=Dca55740.1.exon14;Parent=Dca55740.1
scaffold78	Augustus	exon	334259	334422	.	-	.	ID=Dca55740.1.exon15;Parent=Dca55740.1
scaffold78	Augustus	exon	334527	334619	.	-	.	ID=Dca55740.1.exon16;Parent=Dca55740.1
scaffold78	Augustus	exon	334779	334891	.	-	.	ID=Dca55740.1.exon17;Parent=Dca55740.1
scaffold78	Augustus	exon	336003	336174	.	-	.	ID=Dca55740.1.exon18;Parent=Dca55740.1
scaffold78	Augustus	exon	337083	337139	.	-	.	ID=Dca55740.1.exon19;Parent=Dca55740.1