Dca55744.1
Annotation
- 3-exons
- f-1
- sp|D7T9H0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g02130#GO:0016998#0F1P0C
- AT5G23130.1 | Symbols: | Peptidoglycan-binding LysM domain-containing protein | chr5:7781475-7783333 FORWARD LENGTH=397
- Repeat List (scaffold78)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55744.1 |
13 |
365 |
365 |
51.5 |
353 |
48 |
6e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T9H0_VITVI |
18 |
398 |
398 |
95.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55744.1 |
58 |
365 |
365 |
45.75 |
308 |
50 |
1e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G23130.1 |
69 |
397 |
397 |
82.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold78 |
Augustus |
mRNA |
355551 |
358962 |
. |
+ |
. |
ID=Dca55744.1;Parent=Dca55744 |
| scaffold78 |
Augustus |
exon |
355551 |
355787 |
. |
+ |
. |
ID=Dca55744.1.exon1;Parent=Dca55744.1 |
| scaffold78 |
Augustus |
exon |
357006 |
357136 |
. |
+ |
. |
ID=Dca55744.1.exon2;Parent=Dca55744.1 |
| scaffold78 |
Augustus |
exon |
358233 |
358962 |
. |
+ |
. |
ID=Dca55744.1.exon3;Parent=Dca55744.1 |
