Carnation DB

Dca55781.1

Annotation

18-exons
f-1
sp|F6GU12_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02770#GO:0005488#1F0P0C
AT1G07990.1 | Symbols: | SIT4 phosphatase-associated family protein | chr1:2477413-2482898 FORWARD LENGTH=802
Repeat List (scaffold781)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55781.1	76	815	815	63.68	740	65	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GU12_VITVI	49	851	851	94.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55781.1	76	815	815	57.17	740	60	0
Target_name	Start	End	Length	Cov(%)
AT1G07990.1	49	802	802	94.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold781	Augus-PASA	mRNA	37193	48600	.	-	.	ID=Dca55781.1;Parent=Dca55781
scaffold781	Augus-PASA	exon	37193	37952	.	-	.	ID=Dca55781.1.exon1;Parent=Dca55781.1
scaffold781	Augus-PASA	exon	38606	38676	.	-	.	ID=Dca55781.1.exon2;Parent=Dca55781.1
scaffold781	Augus-PASA	exon	38834	38863	.	-	.	ID=Dca55781.1.exon3;Parent=Dca55781.1
scaffold781	Augus-PASA	exon	38976	39117	.	-	.	ID=Dca55781.1.exon4;Parent=Dca55781.1
scaffold781	Augustus	exon	40006	40088	.	-	.	ID=Dca55781.1.exon5;Parent=Dca55781.1
scaffold781	Augustus	exon	41224	41389	.	-	.	ID=Dca55781.1.exon6;Parent=Dca55781.1
scaffold781	Augustus	exon	41484	41587	.	-	.	ID=Dca55781.1.exon7;Parent=Dca55781.1
scaffold781	Augustus	exon	43396	43493	.	-	.	ID=Dca55781.1.exon8;Parent=Dca55781.1
scaffold781	Augustus	exon	43744	43949	.	-	.	ID=Dca55781.1.exon9;Parent=Dca55781.1
scaffold781	Augustus	exon	44039	44133	.	-	.	ID=Dca55781.1.exon10;Parent=Dca55781.1
scaffold781	Augustus	exon	45002	45118	.	-	.	ID=Dca55781.1.exon11;Parent=Dca55781.1
scaffold781	Augustus	exon	45207	45266	.	-	.	ID=Dca55781.1.exon12;Parent=Dca55781.1
scaffold781	Augustus	exon	45821	45874	.	-	.	ID=Dca55781.1.exon13;Parent=Dca55781.1
scaffold781	Augustus	exon	45964	46038	.	-	.	ID=Dca55781.1.exon14;Parent=Dca55781.1
scaffold781	Augustus	exon	46145	46220	.	-	.	ID=Dca55781.1.exon15;Parent=Dca55781.1
scaffold781	Augustus	exon	46979	47065	.	-	.	ID=Dca55781.1.exon16;Parent=Dca55781.1
scaffold781	Augustus	exon	48276	48323	.	-	.	ID=Dca55781.1.exon17;Parent=Dca55781.1
scaffold781	Augustus	exon	48425	48600	.	-	.	ID=Dca55781.1.exon18;Parent=Dca55781.1