Dca5579.1
Annotation
- 3-exons
- f-1
- sp|B9SN60_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1185620#GO:0005488#1F0P0C
- AT5G22820.2 | Symbols: | ARM repeat superfamily protein | chr5:7623886-7626943 REVERSE LENGTH=534
- Repeat List (scaffold12143)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5579.1 |
1 |
153 |
155 |
54.83 |
153 |
51 |
4e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SN60_RICCO |
379 |
542 |
596 |
27.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5579.1 |
1 |
153 |
155 |
37.41 |
153 |
35 |
8e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G22820.2 |
365 |
527 |
534 |
30.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12143 |
Augustus |
mRNA |
641 |
1561 |
. |
+ |
. |
ID=Dca5579.1;Parent=Dca5579 |
| scaffold12143 |
Augustus |
exon |
641 |
725 |
. |
+ |
. |
ID=Dca5579.1.exon1;Parent=Dca5579.1 |
| scaffold12143 |
Augustus |
exon |
1017 |
1291 |
. |
+ |
. |
ID=Dca5579.1.exon2;Parent=Dca5579.1 |
| scaffold12143 |
Augustus |
exon |
1454 |
1561 |
. |
+ |
. |
ID=Dca5579.1.exon3;Parent=Dca5579.1 |
