Dca55790.1
Annotation
- 4-exons
- f-1
- sp|D7SMF7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0137g00240#unknown#0F0P0C
- AT1G67750.1 | Symbols: | Pectate lyase family protein | chr1:25401660-25403165 FORWARD LENGTH=408
- Repeat List (scaffold781)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55790.1 |
2 |
381 |
397 |
59.44 |
380 |
59 |
2e-132
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SMF7_VITVI |
19 |
403 |
403 |
95.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55790.1 |
2 |
381 |
397 |
58.18 |
380 |
58 |
5e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G67750.1 |
24 |
408 |
408 |
94.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold781 |
Augustus |
mRNA |
104537 |
105978 |
. |
+ |
. |
ID=Dca55790.1;Parent=Dca55790 |
| scaffold781 |
Augustus |
exon |
104537 |
104601 |
. |
+ |
. |
ID=Dca55790.1.exon1;Parent=Dca55790.1 |
| scaffold781 |
Augustus |
exon |
104701 |
105375 |
. |
+ |
. |
ID=Dca55790.1.exon2;Parent=Dca55790.1 |
| scaffold781 |
Augustus |
exon |
105442 |
105622 |
. |
+ |
. |
ID=Dca55790.1.exon3;Parent=Dca55790.1 |
| scaffold781 |
Augustus |
exon |
105706 |
105978 |
. |
+ |
. |
ID=Dca55790.1.exon4;Parent=Dca55790.1 |
