Carnation DB

Dca5582.1

Annotation

9-exons
f-1
sp|D7M667_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_910860#unknown#0F0P0C
sp|Q2KP21_SOLLC#Stress regulated protein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
Repeat List (scaffold1215)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5582.1	652	950	956	23.01	299	72	4e-131
Target_name	Start	End	Length	Cov(%)
sp\|D7M667_ARALL	34	341	341	90.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5582.1	652	950	956	22.69	299	71	1e-130
Target_name	Start	End	Length	Cov(%)
AT5G27290.1	34	341	341	90.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1215	Augustus	mRNA	23465	28415	.	+	.	ID=Dca5582.1;Parent=Dca5582
scaffold1215	Augustus	exon	23465	24310	.	+	.	ID=Dca5582.1.exon1;Parent=Dca5582.1
scaffold1215	Augustus	exon	24389	25502	.	+	.	ID=Dca5582.1.exon2;Parent=Dca5582.1
scaffold1215	Augustus	exon	26170	26312	.	+	.	ID=Dca5582.1.exon3;Parent=Dca5582.1
scaffold1215	Augustus	exon	26818	27036	.	+	.	ID=Dca5582.1.exon4;Parent=Dca5582.1
scaffold1215	Augustus	exon	27148	27234	.	+	.	ID=Dca5582.1.exon5;Parent=Dca5582.1
scaffold1215	Augustus	exon	27401	27547	.	+	.	ID=Dca5582.1.exon6;Parent=Dca5582.1
scaffold1215	Augustus	exon	27942	28037	.	+	.	ID=Dca5582.1.exon7;Parent=Dca5582.1
scaffold1215	Augustus	exon	28126	28179	.	+	.	ID=Dca5582.1.exon8;Parent=Dca5582.1
scaffold1215	Augustus	exon	28251	28415	.	+	.	ID=Dca5582.1.exon9;Parent=Dca5582.1