Carnation DB

Dca5601.1

Annotation

8-exons
f-1
sp|F6GVJ5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0137g00280#GO:0005856;GO:0003779;GO:0005524;GO:0030833#2F1P1C
Os02t0596900-01 Actin/actin-like family protein.
Repeat List (scaffold1216)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5601.1	1	391	391	90.28	391	83	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GVJ5_VITVI	1	428	428	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5601.1	4	391	391	85.67	388	79	0
Target_name	Start	End	Length	Cov(%)
Os02t0596900-01	3	428	429	99.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1216	Augustus	mRNA	38957	42595	.	-	.	ID=Dca5601.1;Parent=Dca5601
scaffold1216	Augustus	exon	38957	39037	.	-	.	ID=Dca5601.1.exon1;Parent=Dca5601.1
scaffold1216	Augustus	exon	39313	39411	.	-	.	ID=Dca5601.1.exon2;Parent=Dca5601.1
scaffold1216	Augustus	exon	39497	39622	.	-	.	ID=Dca5601.1.exon3;Parent=Dca5601.1
scaffold1216	Augustus	exon	40293	40412	.	-	.	ID=Dca5601.1.exon4;Parent=Dca5601.1
scaffold1216	Augustus	exon	40534	40626	.	-	.	ID=Dca5601.1.exon5;Parent=Dca5601.1
scaffold1216	Augustus	exon	40788	40934	.	-	.	ID=Dca5601.1.exon6;Parent=Dca5601.1
scaffold1216	Augustus	exon	41172	41631	.	-	.	ID=Dca5601.1.exon7;Parent=Dca5601.1
scaffold1216	Augustus	exon	42546	42595	.	-	.	ID=Dca5601.1.exon8;Parent=Dca5601.1