Dca5611.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12167)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5611.1 |
1 |
175 |
181 |
63.53 |
175 |
55 |
3e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
893 |
896 |
23.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5611.1 |
4 |
166 |
181 |
35.91 |
163 |
33 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1384 |
1401 |
14.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12167 |
Augustus |
mRNA |
13138 |
13794 |
. |
+ |
. |
ID=Dca5611.1;Parent=Dca5611 |
| scaffold12167 |
Augustus |
exon |
13138 |
13213 |
. |
+ |
. |
ID=Dca5611.1.exon1;Parent=Dca5611.1 |
| scaffold12167 |
Augustus |
exon |
13325 |
13794 |
. |
+ |
. |
ID=Dca5611.1.exon2;Parent=Dca5611.1 |
