Carnation DB

Dca56217.1

Annotation

8-exons
f-1
sp|B9HMK8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563930#unknown#0F0P0C
sp|D7LBT8_ARALL#Thylakoid lumenal 15 kDa protein, chloroplast#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_483621#unknown#0F0P0C
Repeat List (scaffold7936)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56217.1	1	231	232	68.96	231	70	2e-80
Target_name	Start	End	Length	Cov(%)
sp\|B9HMK8_POPTR	1	217	218	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56217.1	44	231	232	65.08	188	80	1e-79
Target_name	Start	End	Length	Cov(%)
AT2G44920.2	33	223	224	85.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7936	Augustus	mRNA	1514	4878	.	+	.	ID=Dca56217.1;Parent=Dca56217
scaffold7936	Augustus	exon	1514	1639	.	+	.	ID=Dca56217.1.exon1;Parent=Dca56217.1
scaffold7936	Augustus	exon	1737	1883	.	+	.	ID=Dca56217.1.exon2;Parent=Dca56217.1
scaffold7936	Augustus	exon	3054	3149	.	+	.	ID=Dca56217.1.exon3;Parent=Dca56217.1
scaffold7936	Augus-PASA	exon	3269	3341	.	+	.	ID=Dca56217.1.exon4;Parent=Dca56217.1
scaffold7936	Augus-PASA	exon	3979	4040	.	+	.	ID=Dca56217.1.exon5;Parent=Dca56217.1
scaffold7936	Augus-PASA	exon	4268	4349	.	+	.	ID=Dca56217.1.exon6;Parent=Dca56217.1
scaffold7936	Augus-PASA	exon	4682	4742	.	+	.	ID=Dca56217.1.exon7;Parent=Dca56217.1
scaffold7936	Augus-PASA	exon	4827	4878	.	+	.	ID=Dca56217.1.exon8;Parent=Dca56217.1