Dca5632.1
Annotation
- 4-exons
- f-1
- sp|A2I5F8_BETVU#Integrase#Beta vulgaris (Sugar beet)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12171)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5632.1 |
1 |
510 |
608 |
30.59 |
510 |
35 |
9e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5F8_BETVU |
140 |
638 |
1516 |
32.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5632.1 |
430 |
510 |
608 |
4.93 |
81 |
36 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
361 |
445 |
1428 |
5.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12171 |
Augustus |
mRNA |
9681 |
13251 |
. |
- |
. |
ID=Dca5632.1;Parent=Dca5632 |
| scaffold12171 |
Augustus |
exon |
9681 |
9970 |
. |
- |
. |
ID=Dca5632.1.exon1;Parent=Dca5632.1 |
| scaffold12171 |
Augustus |
exon |
11009 |
11282 |
. |
- |
. |
ID=Dca5632.1.exon2;Parent=Dca5632.1 |
| scaffold12171 |
Augustus |
exon |
11851 |
12466 |
. |
- |
. |
ID=Dca5632.1.exon3;Parent=Dca5632.1 |
| scaffold12171 |
Augustus |
exon |
12605 |
13251 |
. |
- |
. |
ID=Dca5632.1.exon4;Parent=Dca5632.1 |
