Dca56335.1
Annotation
- 2-exons
- f-1
- sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold7971)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56335.1 |
31 |
211 |
214 |
39.71 |
181 |
47 |
7e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81068_ARATH |
745 |
924 |
1529 |
11.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56335.1 |
38 |
201 |
214 |
30.37 |
164 |
40 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
350 |
513 |
857 |
19.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7971 |
Augustus |
mRNA |
1157 |
1926 |
. |
- |
. |
ID=Dca56335.1;Parent=Dca56335 |
| scaffold7971 |
Augustus |
exon |
1157 |
1712 |
. |
- |
. |
ID=Dca56335.1.exon1;Parent=Dca56335.1 |
| scaffold7971 |
Augustus |
exon |
1838 |
1926 |
. |
- |
. |
ID=Dca56335.1.exon2;Parent=Dca56335.1 |
