Carnation DB

Dca56365.1

Annotation

11-exons
f-1
sp|B9GYM1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1073630#GO:0008474;GO:0006464#1F1P0C
Os10t0563000-01 Similar to Palmitoyl-protein thioesterase-like.
Repeat List (scaffold798)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56365.1	2	304	308	69.48	303	71	6e-131
Target_name	Start	End	Length	Cov(%)
sp\|B9GYM1_POPTR	1	303	352	86.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56365.1	19	308	308	65.58	290	70	3e-124
Target_name	Start	End	Length	Cov(%)
Os10t0563000-01	24	313	315	92.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold798	Augus-PASA	mRNA	141321	145940	.	+	.	ID=Dca56365.1;Parent=Dca56365
scaffold798	Augus-PASA	exon	141321	141417	.	+	.	ID=Dca56365.1.exon1;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	143003	143087	.	+	.	ID=Dca56365.1.exon2;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	143421	143472	.	+	.	ID=Dca56365.1.exon3;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	143598	143672	.	+	.	ID=Dca56365.1.exon4;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	143947	143997	.	+	.	ID=Dca56365.1.exon5;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	144301	144363	.	+	.	ID=Dca56365.1.exon6;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	144616	144681	.	+	.	ID=Dca56365.1.exon7;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	144797	144835	.	+	.	ID=Dca56365.1.exon8;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	145317	145439	.	+	.	ID=Dca56365.1.exon9;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	145527	145619	.	+	.	ID=Dca56365.1.exon10;Parent=Dca56365.1
scaffold798	Augus-PASA	exon	145758	145940	.	+	.	ID=Dca56365.1.exon11;Parent=Dca56365.1