Carnation DB

Dca56424.1

Annotation

7-exons
f-1
sp|D7U401_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0033g01350#unknown#0F0P0C
Os03t0253800-01 Mitochondrial import inner membrane translocase, subunit Tim21 domain containing protein.
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56424.1	84	269	269	46.09	186	67	9e-72
Target_name	Start	End	Length	Cov(%)
sp\|D7U401_VITVI	130	314	314	58.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56424.1	1	269	269	50.55	269	50	7e-70
Target_name	Start	End	Length	Cov(%)
Os03t0253800-01	1	265	266	99.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augus-PASA	mRNA	115351	119072	.	-	.	ID=Dca56424.1;Parent=Dca56424
scaffold8	Augus-PASA	exon	115351	115509	.	-	.	ID=Dca56424.1.exon1;Parent=Dca56424.1
scaffold8	Augus-PASA	exon	115916	116035	.	-	.	ID=Dca56424.1.exon2;Parent=Dca56424.1
scaffold8	Augus-PASA	exon	116588	116636	.	-	.	ID=Dca56424.1.exon3;Parent=Dca56424.1
scaffold8	Augus-PASA	exon	116715	116893	.	-	.	ID=Dca56424.1.exon4;Parent=Dca56424.1
scaffold8	Augus-PASA	exon	117581	117726	.	-	.	ID=Dca56424.1.exon5;Parent=Dca56424.1
scaffold8	Augus-PASA	exon	118420	118514	.	-	.	ID=Dca56424.1.exon6;Parent=Dca56424.1
scaffold8	Augus-PASA	exon	119011	119072	.	-	.	ID=Dca56424.1.exon7;Parent=Dca56424.1