Carnation DB

Dca56444.1

Annotation

9-exons
f-1
sp|D7UE56_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0360g00050#GO:0016591;GO:0019901;GO:0000079;GO:0006355#1F2P1C
sp|G7L053_MEDTR#Cyclin-C1-2#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g055650#GO:0016591;GO:0019901;GO:0000079;GO:0006355#1F2P1C
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56444.1	1	252	252	76.98	252	77	2e-114
Target_name	Start	End	Length	Cov(%)
sp\|D7UE56_VITVI	1	251	251	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56444.1	1	252	252	72.22	252	71	3e-105
Target_name	Start	End	Length	Cov(%)
Os09t0504400-01	1	257	258	99.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augus-PASA	mRNA	245439	248740	.	-	.	ID=Dca56444.1;Parent=Dca56444
scaffold8	Augus-PASA	exon	245439	245543	.	-	.	ID=Dca56444.1.exon1;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	245840	245987	.	-	.	ID=Dca56444.1.exon2;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	246068	246112	.	-	.	ID=Dca56444.1.exon3;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	246342	246459	.	-	.	ID=Dca56444.1.exon4;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	246557	246675	.	-	.	ID=Dca56444.1.exon5;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	246961	247005	.	-	.	ID=Dca56444.1.exon6;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	247493	247532	.	-	.	ID=Dca56444.1.exon7;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	248489	248595	.	-	.	ID=Dca56444.1.exon8;Parent=Dca56444.1
scaffold8	Augus-PASA	exon	248709	248740	.	-	.	ID=Dca56444.1.exon9;Parent=Dca56444.1