Carnation DB

Dca56450.1

Annotation

6-exons
f-1
sp|B9GQM3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_799475#GO:0016021;GO:0046923;GO:0006621#1F1P1C
AT3G25160.1 | Symbols: | ER lumen protein retaining receptor family protein | chr3:9160337-9162023 REVERSE LENGTH=272
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56450.1	1	273	276	55.07	273	56	4e-84
Target_name	Start	End	Length	Cov(%)
sp\|B9GQM3_POPTR	1	270	271	99.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56450.1	1	273	276	52.89	273	54	1e-82
Target_name	Start	End	Length	Cov(%)
AT3G25160.1	1	271	272	99.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augus-PASA	mRNA	277202	279147	.	+	.	ID=Dca56450.1;Parent=Dca56450
scaffold8	Augus-PASA	exon	277202	277436	.	+	.	ID=Dca56450.1.exon1;Parent=Dca56450.1
scaffold8	Augus-PASA	exon	278136	278335	.	+	.	ID=Dca56450.1.exon2;Parent=Dca56450.1
scaffold8	Augus-PASA	exon	278419	278559	.	+	.	ID=Dca56450.1.exon3;Parent=Dca56450.1
scaffold8	Augus-PASA	exon	278650	278730	.	+	.	ID=Dca56450.1.exon4;Parent=Dca56450.1
scaffold8	Augus-PASA	exon	278884	279011	.	+	.	ID=Dca56450.1.exon5;Parent=Dca56450.1
scaffold8	Augus-PASA	exon	279102	279147	.	+	.	ID=Dca56450.1.exon6;Parent=Dca56450.1