Carnation DB

Dca56481.1

Annotation

7-exons
f-1
sp|F6I011_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g06360#GO:0008270#1F0P0C
AT3G24800.1 | Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56481.1	18	392	476	42.01	375	49	1e-101
Target_name	Start	End	Length	Cov(%)
sp\|F6I011_VITVI	18	423	470	86.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56481.1	7	360	476	35.92	354	46	1e-89
Target_name	Start	End	Length	Cov(%)
AT3G24800.1	9	370	410	88.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augus-PASA	mRNA	436238	441111	.	+	.	ID=Dca56481.1;Parent=Dca56481
scaffold8	Augus-PASA	exon	436238	436320	.	+	.	ID=Dca56481.1.exon1;Parent=Dca56481.1
scaffold8	Augus-PASA	exon	436897	436925	.	+	.	ID=Dca56481.1.exon2;Parent=Dca56481.1
scaffold8	Augus-PASA	exon	437025	437204	.	+	.	ID=Dca56481.1.exon3;Parent=Dca56481.1
scaffold8	Augus-PASA	exon	437994	438287	.	+	.	ID=Dca56481.1.exon4;Parent=Dca56481.1
scaffold8	Augus-PASA	exon	438446	438649	.	+	.	ID=Dca56481.1.exon5;Parent=Dca56481.1
scaffold8	Augus-PASA	exon	439524	439648	.	+	.	ID=Dca56481.1.exon6;Parent=Dca56481.1
scaffold8	Augus-PASA	exon	440596	441111	.	+	.	ID=Dca56481.1.exon7;Parent=Dca56481.1