Dca5649.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold12189)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5649.1 |
1 |
431 |
431 |
40.13 |
431 |
35 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
128 |
622 |
1717 |
28.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5649.1 |
311 |
402 |
431 |
6.96 |
92 |
33 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
188 |
192 |
47.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12189 |
Augustus |
mRNA |
5535 |
6940 |
. |
+ |
. |
ID=Dca5649.1;Parent=Dca5649 |
| scaffold12189 |
Augustus |
exon |
5535 |
6371 |
. |
+ |
. |
ID=Dca5649.1.exon1;Parent=Dca5649.1 |
| scaffold12189 |
Augustus |
exon |
6483 |
6940 |
. |
+ |
. |
ID=Dca5649.1.exon2;Parent=Dca5649.1 |
