Carnation DB

Dca56524.1

Annotation

13-exons
f-1
sp|D7LQ08_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_484143#unknown#0F0P0C
AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein 3 | chr2:560976-562961 FORWARD LENGTH=303
Repeat List (scaffold80)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56524.1	10	289	345	65.21	280	81	2e-130
Target_name	Start	End	Length	Cov(%)
sp\|D7LQ08_ARALL	28	307	308	90.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56524.1	10	289	345	65.21	280	81	5e-131
Target_name	Start	End	Length	Cov(%)
AT2G02180.1	23	302	303	92.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold80	Augustus	mRNA	8522	13592	.	-	.	ID=Dca56524.1;Parent=Dca56524
scaffold80	Augustus	exon	8522	8617	.	-	.	ID=Dca56524.1.exon1;Parent=Dca56524.1
scaffold80	Augustus	exon	9024	9101	.	-	.	ID=Dca56524.1.exon2;Parent=Dca56524.1
scaffold80	Augustus	exon	9453	9539	.	-	.	ID=Dca56524.1.exon3;Parent=Dca56524.1
scaffold80	Augustus	exon	9946	10023	.	-	.	ID=Dca56524.1.exon4;Parent=Dca56524.1
scaffold80	Augustus	exon	10777	10830	.	-	.	ID=Dca56524.1.exon5;Parent=Dca56524.1
scaffold80	Augustus	exon	10914	10974	.	-	.	ID=Dca56524.1.exon6;Parent=Dca56524.1
scaffold80	Augustus	exon	11692	11737	.	-	.	ID=Dca56524.1.exon7;Parent=Dca56524.1
scaffold80	Augustus	exon	11831	11903	.	-	.	ID=Dca56524.1.exon8;Parent=Dca56524.1
scaffold80	Augustus	exon	12257	12328	.	-	.	ID=Dca56524.1.exon9;Parent=Dca56524.1
scaffold80	Augustus	exon	12460	12552	.	-	.	ID=Dca56524.1.exon10;Parent=Dca56524.1
scaffold80	Augustus	exon	12646	12698	.	-	.	ID=Dca56524.1.exon11;Parent=Dca56524.1
scaffold80	Augustus	exon	12798	12888	.	-	.	ID=Dca56524.1.exon12;Parent=Dca56524.1
scaffold80	Augustus	exon	13437	13592	.	-	.	ID=Dca56524.1.exon13;Parent=Dca56524.1