Carnation DB

Dca56525.1

Annotation

9-exons
f-1
sp|A5BHF8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_009109#GO:0016740#1F0P0C
AT1G23820.1 | Symbols: SPDS1 | spermidine synthase 1 | chr1:8420278-8422724 FORWARD LENGTH=378
Repeat List (scaffold80)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56525.1	260	305	305	13.11	46	87	2e-14
Target_name	Start	End	Length	Cov(%)
sp\|A5BHF8_VITVI	34	79	313	14.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56525.1	209	305	305	16.06	97	48	2e-15
Target_name	Start	End	Length	Cov(%)
AT1G23820.1	45	146	378	26.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold80	Augustus	mRNA	22663	25079	.	+	.	ID=Dca56525.1;Parent=Dca56525
scaffold80	Augustus	exon	22663	22758	.	+	.	ID=Dca56525.1.exon1;Parent=Dca56525.1
scaffold80	Augustus	exon	22852	22974	.	+	.	ID=Dca56525.1.exon2;Parent=Dca56525.1
scaffold80	Augustus	exon	23087	23131	.	+	.	ID=Dca56525.1.exon3;Parent=Dca56525.1
scaffold80	Augustus	exon	23278	23350	.	+	.	ID=Dca56525.1.exon4;Parent=Dca56525.1
scaffold80	Augustus	exon	23437	23508	.	+	.	ID=Dca56525.1.exon5;Parent=Dca56525.1
scaffold80	Augustus	exon	23592	23787	.	+	.	ID=Dca56525.1.exon6;Parent=Dca56525.1
scaffold80	Augustus	exon	23920	24049	.	+	.	ID=Dca56525.1.exon7;Parent=Dca56525.1
scaffold80	Augustus	exon	24804	24923	.	+	.	ID=Dca56525.1.exon8;Parent=Dca56525.1
scaffold80	Augustus	exon	25017	25079	.	+	.	ID=Dca56525.1.exon9;Parent=Dca56525.1