Carnation DB

Dca56585.1

Annotation

5-exons
f-1
sp|A5AU65_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g02040#GO:0008242;GO:0004221;GO:0006511#2F1P0C
Os02t0822200-01 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein.
Repeat List (scaffold800)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56585.1	1	327	333	81.38	327	83	8e-161
Target_name	Start	End	Length	Cov(%)
sp\|A5AU65_VITVI	1	329	334	98.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56585.1	1	333	333	73.87	333	74	3e-150
Target_name	Start	End	Length	Cov(%)
Os02t0822200-01	1	327	332	98.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold800	Augus-PASA	mRNA	76855	80145	.	-	.	ID=Dca56585.1;Parent=Dca56585
scaffold800	Augus-PASA	exon	76855	77628	.	-	.	ID=Dca56585.1.exon1;Parent=Dca56585.1
scaffold800	Augus-PASA	exon	77705	77807	.	-	.	ID=Dca56585.1.exon2;Parent=Dca56585.1
scaffold800	Augus-PASA	exon	77930	77976	.	-	.	ID=Dca56585.1.exon3;Parent=Dca56585.1
scaffold800	Augus-PASA	exon	78685	78731	.	-	.	ID=Dca56585.1.exon4;Parent=Dca56585.1
scaffold800	Augustus	exon	80115	80145	.	-	.	ID=Dca56585.1.exon5;Parent=Dca56585.1