Carnation DB

Dca56598.1

Annotation

6-exons
f-1
sp|A5B663_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g01360#GO:0016021;GO:0005524;GO:0015662;GO:0005507;GO:0006754;GO:0006825#3F2P1C
sp|G7INF6_MEDTR#Copper-transporting ATPase RAN1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g035840#GO:0016021;GO:0005524;GO:0015662;GO:0005507;GO:0006754;GO:0006825#3F2P1C
Repeat List (scaffold8000)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56598.1	25	374	388	62.88	350	69	2e-139
Target_name	Start	End	Length	Cov(%)
sp\|A5B663_VITVI	615	970	1000	35.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56598.1	25	374	388	59.79	350	66	3e-134
Target_name	Start	End	Length	Cov(%)
AT5G44790.1	618	971	1001	35.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8000	Augustus	mRNA	22513	25077	.	+	.	ID=Dca56598.1;Parent=Dca56598
scaffold8000	Augustus	exon	22513	22658	.	+	.	ID=Dca56598.1.exon1;Parent=Dca56598.1
scaffold8000	Augustus	exon	23366	23421	.	+	.	ID=Dca56598.1.exon2;Parent=Dca56598.1
scaffold8000	Augustus	exon	23536	23615	.	+	.	ID=Dca56598.1.exon3;Parent=Dca56598.1
scaffold8000	Augustus	exon	23704	23901	.	+	.	ID=Dca56598.1.exon4;Parent=Dca56598.1
scaffold8000	Augustus	exon	23987	24244	.	+	.	ID=Dca56598.1.exon5;Parent=Dca56598.1
scaffold8000	Augustus	exon	24649	25077	.	+	.	ID=Dca56598.1.exon6;Parent=Dca56598.1