Dca56618.1
Annotation
- 3-exons
- f-1
- sp|B9H8N8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_715189#GO:0016853;GO:0005529;GO:0005975#2F1P0C
- sp|B9T1C0_RICCO#Polysialic acid capsule expression protein kpsF, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0500130#GO:0019146;GO:0005529;GO:0005975#2F1P0C
- Repeat List (scaffold801)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56618.1 |
1 |
345 |
345 |
78.55 |
345 |
79 |
9e-158
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H8N8_POPTR |
1 |
341 |
341 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56618.1 |
29 |
345 |
345 |
69.85 |
317 |
77 |
3e-141
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G54690.1 |
34 |
350 |
350 |
90.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold801 |
Augus-PASA |
mRNA |
16903 |
22573 |
. |
+ |
. |
ID=Dca56618.1;Parent=Dca56618 |
| scaffold801 |
Augus-PASA |
exon |
16903 |
17559 |
. |
+ |
. |
ID=Dca56618.1.exon1;Parent=Dca56618.1 |
| scaffold801 |
Augus-PASA |
exon |
20220 |
20443 |
. |
+ |
. |
ID=Dca56618.1.exon2;Parent=Dca56618.1 |
| scaffold801 |
Augus-PASA |
exon |
22417 |
22573 |
. |
+ |
. |
ID=Dca56618.1.exon3;Parent=Dca56618.1 |
