Dca5663.1
Annotation
- 3-exons
- f-1
- sp|B9HLD4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766605#GO:0005488#1F0P0C
- AT1G13160.1 | Symbols: | ARM repeat superfamily protein | chr1:4484634-4488388 FORWARD LENGTH=804
- Repeat List (scaffold12197)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5663.1 |
12 |
223 |
232 |
51.72 |
212 |
53 |
1e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HLD4_POPTR |
2 |
230 |
791 |
28.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5663.1 |
10 |
223 |
232 |
42.67 |
214 |
43 |
2e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G13160.1 |
7 |
237 |
804 |
28.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12197 |
Augustus |
mRNA |
6574 |
7478 |
. |
+ |
. |
ID=Dca5663.1;Parent=Dca5663 |
| scaffold12197 |
Augustus |
exon |
6574 |
6981 |
. |
+ |
. |
ID=Dca5663.1.exon1;Parent=Dca5663.1 |
| scaffold12197 |
Augustus |
exon |
7112 |
7243 |
. |
+ |
. |
ID=Dca5663.1.exon2;Parent=Dca5663.1 |
| scaffold12197 |
Augustus |
exon |
7320 |
7478 |
. |
+ |
. |
ID=Dca5663.1.exon3;Parent=Dca5663.1 |
