Dca56641.1
Annotation
- 2-exons
- f-1
- sp|Q8W3S5_SILCU#Reverse transcriptase#Silene cucubalus (Alpen leimkraut) (Bladder campion)#Name=VUR4#GO:0003964#1F0P0C
- Repeat List (scaffold802)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56641.1 |
1 |
89 |
136 |
61.02 |
89 |
94 |
4e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8W3S5_SILCU |
2 |
90 |
92 |
96.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56641.1 |
1 |
89 |
136 |
29.41 |
89 |
45 |
3e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1022 |
1110 |
1428 |
6.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold802 |
Augustus |
mRNA |
2488 |
3230 |
. |
+ |
. |
ID=Dca56641.1;Parent=Dca56641 |
| scaffold802 |
Augustus |
exon |
2488 |
2744 |
. |
+ |
. |
ID=Dca56641.1.exon1;Parent=Dca56641.1 |
| scaffold802 |
Augustus |
exon |
3077 |
3230 |
. |
+ |
. |
ID=Dca56641.1.exon2;Parent=Dca56641.1 |
