Dca56662.1
Annotation
- 2-exons
- f-1
- sp|Q53ND1_ORYSJ#Retrotransposon protein, putative, Ty1-copia sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g05840#GO:0005622;GO:0004527;GO:0003676;GO:0008270;GO:0015074#3F1P1C
- Repeat List (scaffold8024)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56662.1 |
23 |
526 |
526 |
56.27 |
504 |
56 |
4e-166
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53ND1_ORYSJ |
717 |
1239 |
2340 |
22.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56662.1 |
19 |
525 |
526 |
34.41 |
507 |
33 |
3e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
551 |
1100 |
1401 |
39.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8024 |
Augustus |
mRNA |
11319 |
12999 |
. |
- |
. |
ID=Dca56662.1;Parent=Dca56662 |
| scaffold8024 |
Augustus |
exon |
11319 |
12068 |
. |
- |
. |
ID=Dca56662.1.exon1;Parent=Dca56662.1 |
| scaffold8024 |
Augustus |
exon |
12169 |
12999 |
. |
- |
. |
ID=Dca56662.1.exon2;Parent=Dca56662.1 |
