Carnation DB

Dca5675.1

Annotation

6-exons
f-1
sp|F6GV04_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04890#GO:0016021;GO:0004252;GO:0006508#1F1P1C
AT2G29050.1 | Symbols: ATRBL1, RBL1 | RHOMBOID-like 1 | chr2:12478245-12480121 FORWARD LENGTH=389
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5675.1	1	357	357	73.1	357	73	7e-151
Target_name	Start	End	Length	Cov(%)
sp\|F6GV04_VITVI	31	391	391	92.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5675.1	13	356	357	63.86	344	67	3e-139
Target_name	Start	End	Length	Cov(%)
AT2G29050.1	46	388	389	88.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augustus	mRNA	63608	65949	.	-	.	ID=Dca5675.1;Parent=Dca5675
scaffold122	Augustus	exon	63608	63730	.	-	.	ID=Dca5675.1.exon1;Parent=Dca5675.1
scaffold122	Augustus	exon	63989	64115	.	-	.	ID=Dca5675.1.exon2;Parent=Dca5675.1
scaffold122	Augustus	exon	64222	64481	.	-	.	ID=Dca5675.1.exon3;Parent=Dca5675.1
scaffold122	Augustus	exon	64711	64874	.	-	.	ID=Dca5675.1.exon4;Parent=Dca5675.1
scaffold122	Augustus	exon	65023	65186	.	-	.	ID=Dca5675.1.exon5;Parent=Dca5675.1
scaffold122	Augustus	exon	65714	65949	.	-	.	ID=Dca5675.1.exon6;Parent=Dca5675.1