Dca56762.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold806)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56762.1 |
1 |
148 |
184 |
50.54 |
148 |
54 |
3e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
812 |
896 |
19.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56762.1 |
10 |
144 |
184 |
29.34 |
135 |
34 |
1e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1156 |
1310 |
1401 |
11.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold806 |
Augustus |
mRNA |
20050 |
20681 |
. |
+ |
. |
ID=Dca56762.1;Parent=Dca56762 |
| scaffold806 |
Augustus |
exon |
20050 |
20294 |
. |
+ |
. |
ID=Dca56762.1.exon1;Parent=Dca56762.1 |
| scaffold806 |
Augustus |
exon |
20372 |
20681 |
. |
+ |
. |
ID=Dca56762.1.exon2;Parent=Dca56762.1 |
