Dca56771.1
Annotation
- 3-exons
- f-1
- sp|Q6UU19_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#ORFNames=OSJNBa0096K16.24#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold806)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56771.1 |
30 |
203 |
207 |
46.85 |
174 |
56 |
5e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6UU19_ORYSJ |
203 |
375 |
803 |
21.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56771.1 |
30 |
118 |
207 |
18.35 |
89 |
43 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
274 |
362 |
591 |
15.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold806 |
Augustus |
mRNA |
116323 |
119000 |
. |
- |
. |
ID=Dca56771.1;Parent=Dca56771 |
| scaffold806 |
Augustus |
exon |
116323 |
116592 |
. |
- |
. |
ID=Dca56771.1.exon1;Parent=Dca56771.1 |
| scaffold806 |
Augustus |
exon |
116707 |
116991 |
. |
- |
. |
ID=Dca56771.1.exon2;Parent=Dca56771.1 |
| scaffold806 |
Augustus |
exon |
118932 |
119000 |
. |
- |
. |
ID=Dca56771.1.exon3;Parent=Dca56771.1 |
