Dca56836.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold8086)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56836.1 |
1 |
247 |
306 |
51.63 |
247 |
64 |
1e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
884 |
896 |
27.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56836.1 |
39 |
241 |
306 |
23.52 |
203 |
36 |
3e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1179 |
1378 |
1401 |
14.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8086 |
Augustus |
mRNA |
1407 |
6255 |
. |
- |
. |
ID=Dca56836.1;Parent=Dca56836 |
| scaffold8086 |
Augustus |
exon |
1407 |
1559 |
. |
- |
. |
ID=Dca56836.1.exon1;Parent=Dca56836.1 |
| scaffold8086 |
Augustus |
exon |
5488 |
6255 |
. |
- |
. |
ID=Dca56836.1.exon2;Parent=Dca56836.1 |
