Carnation DB

Dca56880.1

Annotation

5-exons
f-1
sp|B9MWG6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_810138#GO:0010181;GO:0016491#2F0P0C
AT1G76690.1 | Symbols: OPR2, ATOPR2 | 12-oxophytodienoate reductase 2 | chr1:28778976-28780355 FORWARD LENGTH=374
Repeat List (scaffold81)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56880.1	1	369	370	78.1	369	79	1e-178
Target_name	Start	End	Length	Cov(%)
sp\|B9MWG6_POPTR	1	369	370	99.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56880.1	8	368	370	71.35	361	74	3e-165
Target_name	Start	End	Length	Cov(%)
AT1G76690.1	12	372	374	96.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold81	Augustus	mRNA	87826	90330	.	-	.	ID=Dca56880.1;Parent=Dca56880
scaffold81	Augustus	exon	87826	88418	.	-	.	ID=Dca56880.1.exon1;Parent=Dca56880.1
scaffold81	Augustus	exon	88535	88711	.	-	.	ID=Dca56880.1.exon2;Parent=Dca56880.1
scaffold81	Augustus	exon	89053	89183	.	-	.	ID=Dca56880.1.exon3;Parent=Dca56880.1
scaffold81	Augustus	exon	89262	89402	.	-	.	ID=Dca56880.1.exon4;Parent=Dca56880.1
scaffold81	Augustus	exon	90260	90330	.	-	.	ID=Dca56880.1.exon5;Parent=Dca56880.1