Carnation DB

Dca5691.1

Annotation

11-exons
f-1
sp|F6GV27_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04460#GO:0016021;GO:0051205#0F1P1C
sp|B9GJQ3_POPTR#Inner membrane protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_706185#GO:0016021;GO:0051205#0F1P1C
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5691.1	1	422	434	73.96	422	72	9e-168
Target_name	Start	End	Length	Cov(%)
sp\|F6GV27_VITVI	1	443	455	97.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5691.1	12	381	434	67.51	370	77	8e-158
Target_name	Start	End	Length	Cov(%)
AT2G28800.1	34	410	462	81.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augus-PASA	mRNA	189574	194427	.	+	.	ID=Dca5691.1;Parent=Dca5691
scaffold122	Augus-PASA	exon	189574	189882	.	+	.	ID=Dca5691.1.exon1;Parent=Dca5691.1
scaffold122	Augus-PASA	exon	190796	190906	.	+	.	ID=Dca5691.1.exon2;Parent=Dca5691.1
scaffold122	Augus-PASA	exon	191372	191446	.	+	.	ID=Dca5691.1.exon3;Parent=Dca5691.1
scaffold122	Augus-PASA	exon	191847	191907	.	+	.	ID=Dca5691.1.exon4;Parent=Dca5691.1
scaffold122	Augus-PASA	exon	192183	192256	.	+	.	ID=Dca5691.1.exon5;Parent=Dca5691.1
scaffold122	Augustus	exon	192355	192459	.	+	.	ID=Dca5691.1.exon6;Parent=Dca5691.1
scaffold122	Augustus	exon	193218	193325	.	+	.	ID=Dca5691.1.exon7;Parent=Dca5691.1
scaffold122	Augustus	exon	193416	193516	.	+	.	ID=Dca5691.1.exon8;Parent=Dca5691.1
scaffold122	Augustus	exon	193873	194007	.	+	.	ID=Dca5691.1.exon9;Parent=Dca5691.1
scaffold122	Augustus	exon	194102	194225	.	+	.	ID=Dca5691.1.exon10;Parent=Dca5691.1
scaffold122	Augustus	exon	194326	194427	.	+	.	ID=Dca5691.1.exon11;Parent=Dca5691.1