Carnation DB

Dca57023.1

Annotation

9-exons
f-1
sp|E0CQH3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g12960#unknown#0F0P0C
AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in basal defense response 1 | chr1:28281789-28283631 REVERSE LENGTH=325
Repeat List (scaffold814)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57023.1	65	331	331	49.84	267	62	1e-93
Target_name	Start	End	Length	Cov(%)
sp\|E0CQH3_VITVI	92	355	355	74.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57023.1	67	331	331	43.8	265	55	6e-84
Target_name	Start	End	Length	Cov(%)
AT1G75380.1	61	325	325	81.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold814	Augus-PASA	mRNA	12737	15593	.	+	.	ID=Dca57023.1;Parent=Dca57023
scaffold814	Augus-PASA	exon	12737	13046	.	+	.	ID=Dca57023.1.exon1;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	13837	14007	.	+	.	ID=Dca57023.1.exon2;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	14098	14147	.	+	.	ID=Dca57023.1.exon3;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	14394	14450	.	+	.	ID=Dca57023.1.exon4;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	14571	14636	.	+	.	ID=Dca57023.1.exon5;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	14725	14799	.	+	.	ID=Dca57023.1.exon6;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	14887	15005	.	+	.	ID=Dca57023.1.exon7;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	15131	15222	.	+	.	ID=Dca57023.1.exon8;Parent=Dca57023.1
scaffold814	Augus-PASA	exon	15538	15593	.	+	.	ID=Dca57023.1.exon9;Parent=Dca57023.1