Carnation DB

Dca57081.1

Annotation

5-exons
f-1
sp|Q2QUB3_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g16840#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
Repeat List (scaffold8159)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57081.1	89	295	295	26.1	207	37	5e-27
Target_name	Start	End	Length	Cov(%)
sp\|Q2QUB3_ORYSJ	1091	1284	1399	13.86

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8159	Augustus	mRNA	16758	18234	.	+	.	ID=Dca57081.1;Parent=Dca57081
scaffold8159	Augustus	exon	16758	16905	.	+	.	ID=Dca57081.1.exon1;Parent=Dca57081.1
scaffold8159	Augustus	exon	17144	17255	.	+	.	ID=Dca57081.1.exon2;Parent=Dca57081.1
scaffold8159	Augustus	exon	17416	17605	.	+	.	ID=Dca57081.1.exon3;Parent=Dca57081.1
scaffold8159	Augustus	exon	17719	17855	.	+	.	ID=Dca57081.1.exon4;Parent=Dca57081.1
scaffold8159	Augustus	exon	17934	18234	.	+	.	ID=Dca57081.1.exon5;Parent=Dca57081.1