Carnation DB

Dca57095.1

Annotation

5-exons
f-1
sp|A5ALU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001308#GO:0005622;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold8160)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57095.1	11	111	134	35.82	101	48	6e-22
Target_name	Start	End	Length	Cov(%)
sp\|A5BLA6_VITVI	768	869	2281	4.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57095.1	1000	1163	1660	3.49	164	35	6e-16
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	234	398	707	23.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8160	Augustus	mRNA	15235	23704	.	+	.	ID=Dca57095.1;Parent=Dca57095
scaffold8160	Augustus	exon	15235	15817	.	+	.	ID=Dca57095.1.exon1;Parent=Dca57095.1
scaffold8160	Augustus	exon	15922	19089	.	+	.	ID=Dca57095.1.exon2;Parent=Dca57095.1
scaffold8160	Augustus	exon	19453	19984	.	+	.	ID=Dca57095.1.exon3;Parent=Dca57095.1
scaffold8160	Augustus	exon	21807	22402	.	+	.	ID=Dca57095.1.exon4;Parent=Dca57095.1
scaffold8160	Augustus	exon	23601	23704	.	+	.	ID=Dca57095.1.exon5;Parent=Dca57095.1