Dca57115.1
Annotation
- 3-exons
- f-1
- sp|D7SPE0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g01770#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
- sp|B9S6H3_RICCO#AP-3 complex subunit sigma-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0536690#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
- Repeat List (scaffold817)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57115.1 |
2 |
89 |
89 |
82.02 |
88 |
83 |
4e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SPE0_VITVI |
58 |
145 |
165 |
53.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57115.1 |
2 |
89 |
89 |
74.15 |
88 |
75 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G50860.1 |
58 |
145 |
166 |
53.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold817 |
Augustus |
mRNA |
46015 |
46574 |
. |
- |
. |
ID=Dca57115.1;Parent=Dca57115 |
| scaffold817 |
Augustus |
exon |
46015 |
46110 |
. |
- |
. |
ID=Dca57115.1.exon1;Parent=Dca57115.1 |
| scaffold817 |
Augustus |
exon |
46194 |
46264 |
. |
- |
. |
ID=Dca57115.1.exon2;Parent=Dca57115.1 |
| scaffold817 |
Augustus |
exon |
46472 |
46574 |
. |
- |
. |
ID=Dca57115.1.exon3;Parent=Dca57115.1 |
