Carnation DB

Dca5713.1

Annotation

7-exons
f-1
sp|G5DWK0_SILLA#Ca2+-transporting ATPase#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0016021;GO:0005524;GO:0015662;GO:0046872;GO:0006812#3F1P1C
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5713.1	1	587	587	90.97	587	91	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWK0_SILLA	430	1018	1018	57.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5713.1	1	587	587	80.4	587	80	0
Target_name	Start	End	Length	Cov(%)
AT1G07670.1	473	1061	1061	55.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augustus	mRNA	327054	329757	.	+	.	ID=Dca5713.1;Parent=Dca5713
scaffold122	Augustus	exon	327054	327120	.	+	.	ID=Dca5713.1.exon1;Parent=Dca5713.1
scaffold122	Augustus	exon	327257	327378	.	+	.	ID=Dca5713.1.exon2;Parent=Dca5713.1
scaffold122	Augustus	exon	327573	327854	.	+	.	ID=Dca5713.1.exon3;Parent=Dca5713.1
scaffold122	Augustus	exon	327961	328338	.	+	.	ID=Dca5713.1.exon4;Parent=Dca5713.1
scaffold122	Augus-PASA	exon	328518	328627	.	+	.	ID=Dca5713.1.exon5;Parent=Dca5713.1
scaffold122	Augus-PASA	exon	328836	329064	.	+	.	ID=Dca5713.1.exon6;Parent=Dca5713.1
scaffold122	Augus-PASA	exon	329182	329757	.	+	.	ID=Dca5713.1.exon7;Parent=Dca5713.1