Carnation DB

Dca57152.1

Annotation

6-exons
f-1
sp|B9H5M4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558643#unknown#0F0P0C
AT4G39380.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: TSL-kinase interacting protein 1 (TAIR:AT2G36960.2). | chr4:18309628-18311874 REVERSE LENGTH=534
Repeat List (scaffold818)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57152.1	34	429	430	40.93	396	43	7e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9H5M4_POPTR	4	380	383	98.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57152.1	31	430	430	34.18	400	33	3e-38
Target_name	Start	End	Length	Cov(%)
AT4G39380.2	87	517	534	80.71

seqname	source	feature	start	end	score	strand	frame	group
scaffold818	Augustus	mRNA	86450	88477	.	-	.	ID=Dca57152.1;Parent=Dca57152
scaffold818	Augustus	exon	86450	86539	.	-	.	ID=Dca57152.1.exon1;Parent=Dca57152.1
scaffold818	Augustus	exon	86644	86766	.	-	.	ID=Dca57152.1.exon2;Parent=Dca57152.1
scaffold818	Augustus	exon	87058	87435	.	-	.	ID=Dca57152.1.exon3;Parent=Dca57152.1
scaffold818	Augustus	exon	87614	87917	.	-	.	ID=Dca57152.1.exon4;Parent=Dca57152.1
scaffold818	Augustus	exon	87991	88232	.	-	.	ID=Dca57152.1.exon5;Parent=Dca57152.1
scaffold818	Augustus	exon	88322	88477	.	-	.	ID=Dca57152.1.exon6;Parent=Dca57152.1