Carnation DB

Dca5717.1

Annotation

22-exons
f-1
sp|F6GTW2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g03700#GO:0005524;GO:0004674;GO:0000155;GO:0006355#3F1P0C
Os11t0102200-00 Similar to NPH1-1.
Repeat List (scaffold122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5717.1	1	988	988	73.48	988	72	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GTW2_VITVI	1	1004	1004	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5717.1	7	988	988	71.45	982	70	0
Target_name	Start	End	Length	Cov(%)
AT3G45780.1	8	996	996	99.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold122	Augustus	mRNA	388244	395095	.	-	.	ID=Dca5717.1;Parent=Dca5717
scaffold122	Augustus	exon	388244	388348	.	-	.	ID=Dca5717.1.exon1;Parent=Dca5717.1
scaffold122	Augustus	exon	388435	388575	.	-	.	ID=Dca5717.1.exon2;Parent=Dca5717.1
scaffold122	Augustus	exon	388662	388774	.	-	.	ID=Dca5717.1.exon3;Parent=Dca5717.1
scaffold122	Augustus	exon	388877	388928	.	-	.	ID=Dca5717.1.exon4;Parent=Dca5717.1
scaffold122	Augustus	exon	389173	389295	.	-	.	ID=Dca5717.1.exon5;Parent=Dca5717.1
scaffold122	Augustus	exon	389409	389515	.	-	.	ID=Dca5717.1.exon6;Parent=Dca5717.1
scaffold122	Augustus	exon	389618	389667	.	-	.	ID=Dca5717.1.exon7;Parent=Dca5717.1
scaffold122	Augustus	exon	389766	389869	.	-	.	ID=Dca5717.1.exon8;Parent=Dca5717.1
scaffold122	Augustus	exon	389950	390030	.	-	.	ID=Dca5717.1.exon9;Parent=Dca5717.1
scaffold122	Augustus	exon	390229	390313	.	-	.	ID=Dca5717.1.exon10;Parent=Dca5717.1
scaffold122	Augustus	exon	390402	390478	.	-	.	ID=Dca5717.1.exon11;Parent=Dca5717.1
scaffold122	Augustus	exon	390709	390798	.	-	.	ID=Dca5717.1.exon12;Parent=Dca5717.1
scaffold122	Augustus	exon	390893	390952	.	-	.	ID=Dca5717.1.exon13;Parent=Dca5717.1
scaffold122	Augustus	exon	391154	391258	.	-	.	ID=Dca5717.1.exon14;Parent=Dca5717.1
scaffold122	Augustus	exon	391359	391408	.	-	.	ID=Dca5717.1.exon15;Parent=Dca5717.1
scaffold122	Augustus	exon	391513	391619	.	-	.	ID=Dca5717.1.exon16;Parent=Dca5717.1
scaffold122	Augustus	exon	391813	391883	.	-	.	ID=Dca5717.1.exon17;Parent=Dca5717.1
scaffold122	Augustus	exon	391984	392218	.	-	.	ID=Dca5717.1.exon18;Parent=Dca5717.1
scaffold122	Augustus	exon	392432	392681	.	-	.	ID=Dca5717.1.exon19;Parent=Dca5717.1
scaffold122	Augustus	exon	393463	393554	.	-	.	ID=Dca5717.1.exon20;Parent=Dca5717.1
scaffold122	Augustus	exon	394117	394302	.	-	.	ID=Dca5717.1.exon21;Parent=Dca5717.1
scaffold122	Augustus	exon	394413	395095	.	-	.	ID=Dca5717.1.exon22;Parent=Dca5717.1