Carnation DB

Dca57278.1

Annotation

9-exons
f-1
sp|B9I993_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_774603#GO:0016787#1F0P0C
AT3G62040.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr3:22975328-22976518 REVERSE LENGTH=249
Repeat List (scaffold82)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57278.1	443	694	694	25.79	252	69	8e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9I993_POPTR	1	261	261	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57278.1	451	694	694	25.07	244	71	1e-99
Target_name	Start	End	Length	Cov(%)
AT3G62040.1	5	249	249	98.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold82	Augustus	mRNA	579405	587915	.	+	.	ID=Dca57278.1;Parent=Dca57278
scaffold82	Augustus	exon	579405	580662	.	+	.	ID=Dca57278.1.exon1;Parent=Dca57278.1
scaffold82	Augustus	exon	585934	585969	.	+	.	ID=Dca57278.1.exon2;Parent=Dca57278.1
scaffold82	Augustus	exon	586062	586145	.	+	.	ID=Dca57278.1.exon3;Parent=Dca57278.1
scaffold82	Augustus	exon	586250	586315	.	+	.	ID=Dca57278.1.exon4;Parent=Dca57278.1
scaffold82	Augustus	exon	586409	586506	.	+	.	ID=Dca57278.1.exon5;Parent=Dca57278.1
scaffold82	Augustus	exon	586742	586867	.	+	.	ID=Dca57278.1.exon6;Parent=Dca57278.1
scaffold82	Augustus	exon	586980	587180	.	+	.	ID=Dca57278.1.exon7;Parent=Dca57278.1
scaffold82	Augustus	exon	587394	587459	.	+	.	ID=Dca57278.1.exon8;Parent=Dca57278.1
scaffold82	Augustus	exon	587766	587915	.	+	.	ID=Dca57278.1.exon9;Parent=Dca57278.1