Carnation DB

Dca57286.1

Annotation

7-exons
f-1
sp|G5DWP8_SILLA#50S ribosomal protein L1#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0015934;GO:0003723;GO:0003735;GO:0006412#2F1P1C
Repeat List (scaffold820)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57286.1	106	351	356	65.73	246	96	7e-137
Target_name	Start	End	Length	Cov(%)
sp\|G5DWP8_SILLA	1	246	246	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57286.1	69	354	356	60.39	286	76	1e-124
Target_name	Start	End	Length	Cov(%)
AT3G63490.1	68	344	346	80.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold820	Augus-PASA	mRNA	21602	24304	.	+	.	ID=Dca57286.1;Parent=Dca57286
scaffold820	Augus-PASA	exon	21602	21961	.	+	.	ID=Dca57286.1.exon1;Parent=Dca57286.1
scaffold820	Augus-PASA	exon	22332	22511	.	+	.	ID=Dca57286.1.exon2;Parent=Dca57286.1
scaffold820	Augus-PASA	exon	22604	22658	.	+	.	ID=Dca57286.1.exon3;Parent=Dca57286.1
scaffold820	Augus-PASA	exon	23143	23270	.	+	.	ID=Dca57286.1.exon4;Parent=Dca57286.1
scaffold820	Augus-PASA	exon	23743	23826	.	+	.	ID=Dca57286.1.exon5;Parent=Dca57286.1
scaffold820	Augus-PASA	exon	23956	24081	.	+	.	ID=Dca57286.1.exon6;Parent=Dca57286.1
scaffold820	Augus-PASA	exon	24167	24304	.	+	.	ID=Dca57286.1.exon7;Parent=Dca57286.1