Carnation DB

Dca57332.1

Annotation

6-exons
f-1
sp|D7MKM9_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_496347#GO:0005783;GO:0016021;GO:0005509;GO:0051082;GO:0006457;GO:0006810#2F2P2C
AT5G61790.1 | Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:24827394-24829642 REVERSE LENGTH=530
Repeat List (scaffold821)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57332.1	31	537	537	73.37	507	78	0
Target_name	Start	End	Length	Cov(%)
sp\|D7MKM9_ARALL	902	1401	1401	35.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57332.1	12	537	537	74.48	526	76	0
Target_name	Start	End	Length	Cov(%)
AT5G61790.1	10	530	530	98.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold821	Augus-PASA	mRNA	99167	102354	.	-	.	ID=Dca57332.1;Parent=Dca57332
scaffold821	Augus-PASA	exon	99167	99304	.	-	.	ID=Dca57332.1.exon1;Parent=Dca57332.1
scaffold821	Augus-PASA	exon	99685	99798	.	-	.	ID=Dca57332.1.exon2;Parent=Dca57332.1
scaffold821	Augus-PASA	exon	99886	99957	.	-	.	ID=Dca57332.1.exon3;Parent=Dca57332.1
scaffold821	Augus-PASA	exon	100045	101174	.	-	.	ID=Dca57332.1.exon4;Parent=Dca57332.1
scaffold821	Augus-PASA	exon	102090	102159	.	-	.	ID=Dca57332.1.exon5;Parent=Dca57332.1
scaffold821	Augus-PASA	exon	102265	102354	.	-	.	ID=Dca57332.1.exon6;Parent=Dca57332.1